Dear Gus123,
Hope you're well. It sounds as if: (a) at some point, coolant contaminated the automatic transmission fluid (ATF) and (b) someone changed the transmission filter, but used the wrong filter.
ATF contaminated with coolant will be a milky pink. I know this from reading posts from those, who have had a failure of the in-radiator ATF cooler.
Because the ATF in your tranny was very dark - but clear - it sounds as if the ATF in your tranny was simply old and/or contaminated with clutch pack fibers, that had been loosened by exposure to water in the coolant.
Inspect the coolant in the cooling system overflow tank. If the coolant has atop it a layer of pink liquid, that's ATF. That means the in-radiator ATF cooler has failed. Replace the radiator at once!!! ATF won't harm the cooling system, but coolant must not get into the ATF.
If the coolant in the overflow tank shows no signs of ATF being present - and presuming the most recent flush has removed all remaining loose clutch pack fibers - I'd go 1,000 miles and re-flush, using Wal-Mart Super-Tech ATF, simply because it is low-cost.
If after going 1,000 miles, the fluid is a clear, rosy red, I'd replace it with Brand Name ATF.
Presuming that the tranny shift smoothly, I'd not replace it, unless you find a low-miles unit at a bargain-basement price. A tranny swap is best done by a transmission shop. I'd ask that the rear main seal be inspected. If it shows signs of leaking, replacement is cheap, once the tranny has been pulled.
Hope this helps.
Yours faithfully,
Spook
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